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Showing 2 results for Khalil Pazir
Mohammad Khalil Pazir, Ashkan Ajdari, Seyed Ahmad Ghasemi, Volume 12, Issue 1 (Spring 2021)
Abstract
Population structure of sea cucumber Holothuria parva in the coasts of Bushehr and Halileh from Persian Gulf was determined by 16S rRNA of mitochondrial genome sequencing in autumn and winter seasons of 2019. In Bushehr and Halileh populations, 2 and 4 haplotypes were identified out of 374 nucleotide sites, respectively, and haplotype 2 was the most abundant in Bushehr population and was observed as a common haplotype with Halileh population. The average haplotypes diversity on the coasts of Bushehr and Halileh was 0.5 and 1, respectively, but nucleotide diversity in the above two populations was 0.0013 and 0.0053, respectively. Due to the high gene flow in the studied populations and the low genetic distance, gene differentiation in both populations was -0.111. Therefore, based on the above and common of the haplotype, it is possible that H. parva collected from the cost of Bushehr and Halileh was the same population.
Mohammad Khalil Pazir, Seyed Ahmad Ghasemi, Khosrow Aein Jamshid , Volume 13, Issue 1 (Spring 2022)
Abstract
The aim of this study was identifying different populations and determining the genetic characteristics of three different sub-adult stocks of Litopenaeus vannamei in hatchery of Iran Shrimp Research Center by microsatellites DNA markers in Bushehr province during from October to November 2019. Up to 50 individuals were sampled per stock, with equal contribution by sex. The tissue preserved in 95% ethanol prior to DNA extraction and genotyping. Total genomic DNA was extracted from each sample, then using 9 microsatellite loci were determined genetic characteristics including genetic diversity, frequency of alleles, inbreeding coefficient, genetic distance, genetic similarity and genetic differentiation. The results showed that the observed heterozygosity range in the three stocks, Hybrid, High Health and Molokai was in the range of 0.11-0.70, 0.16-0.85 and 0.90-0.21, respectively, despite the less genetic diversity of the Hybrid and high health stocks compared to the Molokai reserve, no significant differences were observed. Although the frequency of alleles was in the range of 2-9 in three stocks, but the amount of specific alleles for Hybrid, high health and Molokai were 0.37±0.18, 0.75±0.36 and 0, respectively. Also, the inbreeding coefficient obtained in Molokai, High health and Hybrid stocks was 0.14, 0.31 and 0.41, respectively. Therefore, due to the low genetic differentiation and high genetic similarity of Molokai and Hybrid stocks (0.117 and 0.135) as well as a high genetic distance between them and Health stocks (0.615), were established with the aim of increasing genetic diversity, Molokai and Hybrid stocks as the first population and High health stocks as the second population were introduced.
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